BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C03LP1|AL429182
(573 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig327 1005 0.0
>3x_Contig327
Length = 1076
Score = 1005 bits (496), Expect = 0.0
Identities = 527/549 (95%)
Strand = Plus / Plus
Query: 14 atacctccacctttattaaatgaaccatctcctataataatatgagctaatgattcataa 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atacctccacctttattaaatgaaccatctcctataataatatgagctaatgattcataa 563
Query: 74 tttaataaatcatataaatcatttggtataatttttactctaccattataaaaatgatgt 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttaataaatcatataaatcatttggtataatttttactctaccattataaaaatgatgt 623
Query: 134 cttaatttagtaaaacaaggtaaagctatagtagttatttcaactccataataaatttta 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cttaatttagtaaaacaaggtaaagctatagtagttatttcaactccataataaatttta 683
Query: 194 ccttttaatctttccccgcggactcctcccctgggattaccaggggaggagccgcggggt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccttttaatctttccccgcggactcctcccctgggattaccaggggaggagccgcggggt 743
Query: 254 gttttaattaattttggaggacttacacaataatgatttaatttattatatacatataaa 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gttttaattaattttggaggacttacacaataatgatttaatttattatatacatataaa 803
Query: 314 acatattctacttgttttaaagtttgtttaaattttaatctactattaattaatgtattt 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 acatattctacttgttttaaagtttgtttaaattttaatctactattaattaatgtattt 863
Query: 374 tttgaactatattcaattcaaccatctgttaataaaattccattaattatatatatvaya 433
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 864 tttgaactatattcaattcaaccatctgttaataaaattccattaattatatatataata 923
Query: 434 bkattkgggattttaattatatatktsrttatkatrgtattatbatakkcktkgtttdtt 493
||| || ||||||||||||||| | |||| || ||||||| ||| | | ||| ||
Sbjct: 924 ttatttggaattttaattatatatttaattattatagtattattatattctttatttatt 983
Query: 494 adatttgaatwtaaattagtaccataaattgttaattttttattataataattattatta 553
| |||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 984 aaatttgaatataaattagtaccataaattgttaatttnttattataaaaattattatta 1043
Query: 554 ttattataa 562
|||||||||
Sbjct: 1044 ttattataa 1052
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6560
Number of Sequences: 1807
Number of extensions: 6560
Number of successful extensions: 466
Number of sequences better than 1.0e-20: 1
length of query: 573
length of database: 10,358,551
effective HSP length: 16
effective length of query: 557
effective length of database: 10,329,639
effective search space: 5753608923
effective search space used: 5753608923
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.8 bits)